Detection of vancomycin-resistant Enterococcus faecium hospital-adapted lineages in municipal wastewater treatment plants indicates widespread distribution and release into the environment
Detection of vancomycin-resistant Enterococcus faecium hospital-adapted lineages in municipal wastewater treatment plants indicates widespread distribution and release into the environment
byTheodore Gouliouris, Kathy E Raven, Danesh Moradigaravand, Catherine
Ludden, Francesc Coll, Beth Blane, Plamena Naydenova, Carolyne Horner,
Nicholas M Brown, Jukka Corander, Direk Limmathurotsakul, Julian
Parkhill, Sharon J Peacock
Research ArticleYear:2019
Extra Information
Genome research, 29 (4) 626-634
Abstract
Vancomycin-resistant Enterococcus faecium (VREfm) is a leading
cause of healthcare-associated infection. Reservoirs of VREfm are
largely assumed to be nosocomial although
there is a paucity of data on alternative sources.
Here, we describe an integrated epidemiological and genomic analysis of
E. faecium associated with bloodstream
infection and isolated from wastewater. Treated and untreated wastewater
from 20 municipal treatment
plants in the East of England, United Kingdom was
obtained and cultured to isolate E. faecium, ampicillin-resistant E. faecium (AREfm), and VREfm. VREfm was isolated from all 20 treatment plants and was released into the environment by 17/20 plants,
the exceptions using terminal ultraviolet light disinfection. Median log10
counts of AREfm and VREfm in untreated wastewater from 10 plants in
direct receipt of hospital sewage were significantly
higher than 10 plants that were not. We sequenced
and compared the genomes of 423 isolates from wastewater with 187
isolates
associated with bloodstream infection at five
hospitals in the East of England. Among 481 E. faecium isolates
belonging to the hospital-adapted clade, we observed genetic
intermixing between wastewater and bloodstream infection,
with highly related isolates shared between a major
teaching hospital in the East of England and 9/20 plants. We detected
28 antibiotic resistance genes in the
hospital-adapted clade, of which 23 were represented in bloodstream,
hospital sewage,
and municipal wastewater isolates. We conclude that
our findings are consistent with widespread distribution of
hospital-adapted
VREfm beyond acute healthcare settings with
extensive release of VREfm into the environment in the East of England.