Adaptation through genetic time travel? Fluctuating selection can drive the evolution of bacterial transformationAuthors
Research Article Year: 2014
Authors: Jan Engelstädter, Danesh Moradigaravand
Proceedings of the Royal Society B: Biological Sciences, 281(1775) 20132609
Detection of vancomycin-resistant Enterococcus faecium hospital-adapted lineages in municipal wastewater treatment plants indicates widespread distribution and release into the environment
Research Article Year: 2019
Authors: Theodore Gouliouris, Kathy E Raven, Danesh Moradigaravand, Catherine Ludden, Francesc Coll, Beth Blane, Plamena Naydenova, Carolyne Horner, Nicholas M Brown, Jukka Corander, Direk Limmathurotsakul, Julian Parkhill, Sharon J Peacock
Genome research, 29 (4) 626-634
dfrA thyA Double Deletion in para-Aminosalicylic Acid-Resistant Mycobacterium tuberculosis Beijing Strains
Letter Year: 2016
Authors: Danesh Moradigaravand, Louis Grandjean, Elena Martinez, Hao Li, Jun Zheng, Jorge Coronel, David Moore, M Estée Török, Vitali Sintchenko, Hairong Huang, Babak Javid, Julian Parkhill, Sharon J Peacock, Claudio U Köser
Antimicrobial agents and chemotherapy, 60(6) 3864-3867
Evolution and Epidemiology of Multidrug-Resistant Klebsiella pneumoniae in the United Kingdom and Ireland
Research Article Year: 2017
Authors: Danesh Moradigaravand, Veronique Martin, Sharon J Peacock, Julian Parkhill
MBio, 8(1) e01976-16
Evolution of the Staphylococcus argenteus ST2250 Clone in Northeastern Thailand Is Linked with the Acquisition of Livestock-Associated Staphylococcal Genes
Research Article Year: 2017
Authors: Danesh Moradigaravand, Dorota Jamrozy, Rafal Mostowy, Annaliesa Anderson, Emma K Nickerson, Janjira Thaipadungpanit, Vanaporn Wuthiekanun, Direk Limmathurotsakul, et al.
MBio, 8(4) e00802-17
Fragment-Based De Novo Design of Antimycobacterial Agents and In Vitro Potency Evaluation
Research Article Year: 2016
Authors: Soroush Sardari, Isabel Portugal, Abeer ALKafri, Danesh Moradi, Ghazaleh Ghavami
Combinatorial Chemistry & High Throughput Screening, 19(3) 238-245
Genomic survey of Clostridium difficile reservoirs in the East of England implicates environmental contamination of wastewater treatment plants by clinical lineages
Research Article Year: 2018
Authors: Danesh Moradigaravand, Theodore Gouliouris, Catherine Ludden, Sandra Reuter, Dorota Jamrozy, Beth Blane, Plamena Naydenova, Kim Judge, Sani H Aliyu, Nazreen F Hadjirin, Mark A Holmes, Estée Török, Nicholas M Brown, Julian Parkhill, Sharon Peacock
Microbial genomics, 4(3)
Population Structure of Multidrug-Resistant Klebsiellaoxytoca within Hospitals across the United Kingdom and Ireland Identifies Sharing of Virulence and Resistance Geneswith K. pneumoniae
Research Article Year: 2017
Authors: Danesh Moradigaravand, Veronique Martin, Sharon J Peacock, Julian Parkhill
Genome Biology and Evolution, 9(3) 574-584
Prediction of antibiotic resistance in Escherichia coli from large-scale pan-genome data
Research Article Year: 2018
Authors: Danesh Moradigaravand, Martin Palm, Anne Farewell, Ville Mustonen, Jonas Warringer, Leopold Parts
PLoS computational biology, 4(2)
Recent independent emergence of multiple multidrug-resistant Serratia marcescens clones within the United Kingdom and Ireland
Research Article Year: 2016
Authors: Danesh Moradigaravand, Christine J Boinett, Veronique Martin, Sharon J Peacock, Julian Parkhill
Genome research, 26(8) 1101-1109
Recombination accelerates adaptation on a large-scale empirical fitness landscape in HIV-1
Research Article Year: 2014
Authors: Danesh Moradigaravand, Roger Kouyos, Trevor Hinkley, Mojgan Haddad, Christos J Petropoulos, Jan Engelstädter, Sebastian Bonhoeffer
PLoS genetics, 10(6) e1004439
Role of Alanine Racemase Mutations in Mycobacterium tuberculosisd-Cycloserine Resistance
Research Article Year: 2017
Authors: Yoshio Nakatani, Helen K Opel-Reading, Matthias Merker, Diana Machado, Sönke Andres, S Siva Kumar, Danesh Moradigaravand, et al.
Antimicrobial agents and chemotherapy, 61(12) e01575-17
Some Synonymous and Nonsynonymous gyrA Mutations in Mycobacterium tuberculosis Lead to Systematic False-Positive Fluoroquinolone Resistance Results with the Hain GenoType MTBDRsl Assays
Research Article Year: 2017
Authors: Adebisi Ajileye, Nataly Alvarez, Matthias Merker, Timothy M Walker, Suriya Akter, Kerstin Brown, Danesh Moradigaravand, Thomas Schön, et al.
Antimicrobial agents and chemotherapy, 61(4) e02169-16
The dissemination of multidrug-resistant Enterobacter cloacae throughout the UK and Ireland
Research Article Year: 2016
Authors: Danesh Moradigaravand, Sandra Reuter, Veronique Martin, Sharon J Peacock, Julian Parkhill
Nature microbiology, 1(12) 1-5
The effect of bacterial recombination on adaptation on fitness landscapes with limited peak accessibility
Research Article Year: 2012
Authors: Danesh Moradigaravand, Jan Engelstädter
PLoS computational biology, 8(10) e1002735
The essential mycobacterial amidotransferase GatCAB is a modulator of specific translational fidelity
Research Article Year: 2016
Authors: Hong-Wei Su, Jun-Hao Zhu, Hao Li, Rong-Jun Cai, Christopher Ealand, Xun Wang, Yu-Xiang Chen, Ting F Zhu, Danesh Moradigaravand, Hairong Huang, Bavesh D Kana, Babak Javid
Nature microbiology, 1(11) 1-9
The evolution of natural competence: disentangling costs and benefits of sex in bacteria
Research Article Year: 2013
Authors: Danesh Moradigaravand, Jan Engelstädter
The American Naturalist, 182(4) E112-126
The impact of natural transformation on adaptation in spatially structured bacterial populations
Research Article Year: 2014
Authors: Danesh Moradigaravand, Jan Engelstädter
BMC evolutionary biology, 14(1) 2-9
What is resistance? Impact of phenotypic versus molecular drug resistance testing on therapy for multi-and extensively drug-resistant tuberculosis
Research Article Year: 2018
Authors: Jan Heyckendorf, Sönke Andres, Claudio U Köser, Ioana D Olaru, Thomas Schön, Erik Sturegård, Patrick Beckert, Viola Schleusener, Thomas A Kohl, Doris Hillemann, Danesh Moradigaravand, et al.
Antimicrobial agents and chemotherapy, 62(2) e01550-17
Whole genome sequencing reveals high-resolution epidemiological links between clinical and environmental Klebsiella pneumoniae
Research Article Year: 2017
Authors: Chakkaphan Runcharoen, Danesh Moradigaravand, Beth Blane, Suporn Paksanont, Jeeranan Thammachote, Suthatip Anun, Julian Parkhill, Narisara Chantratita, Sharon J Peacock
Genome medicine, 9(1) 1-10