Population Structure of Multidrug-Resistant Klebsiellaoxytoca within Hospitals across the United Kingdom and Ireland Identifies Sharing of Virulence and Resistance Geneswith K. pneumoniae

by Danesh Moradigaravand, Veronique Martin, Sharon J Peacock, Julian Parkhill
Research Article Year: 2017

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Genome Biology and Evolution, 9(3) 574-584

Abstract

Klebsiella oxytoca, a member of the Enterobacteriaceae, is a gram-negative pathogenic bacterium of environmental origin, which can cause infection in healthcare settings. Outbreaks of multidrug-resistant K. oxytoca infection have been increasingly reported in hospitalized patients. Despite the growing importance of this pathogen, there is limited knowledge about the population structure and epidemiology of antimicrobial resistant K. oxytoca. We investigated the population structure and genomic basis of antimicrobial resistance of 41 multidrug resistant K. oxytoca isolates recovered from bloodstream infections across the UK and Ireland. Our results show that K. oxytoca has a highly diverse population, which is composed of several distinct clades, and we identified one recent expansion of a clone within our dataset. Although the K. oxytoca genomes are clearly distinct from the genomes of a global collection of …